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  • Negative cofitness for GFF3614 from Variovorax sp. SCN45

    UPF0056 inner membrane protein YchE
    SEED: Multiple antibiotic resistance protein marC
    KEGG: multiple antibiotic resistance protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF429 RND efflux system, inner membrane transporter -0.52
    2 GFF2738 hypothetical protein -0.51
    3 GFF4426 Homolog of eukaryotic DNA ligase III -0.46
    4 GFF5441 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein -0.46
    5 GFF4422 Conjugative transfer protein TrbG -0.45
    6 GFF6856 DipZ protein -0.45
    7 GFF5437 Amine oxidase, flavin-containing -0.45
    8 GFF4573 L-carnitine dehydratase/bile acid-inducible protein F -0.45
    9 GFF5709 no description -0.44
    10 GFF5377 Transcriptional regulator, AcrR family -0.44
    11 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) -0.44
    12 GFF1310 hypothetical protein -0.44
    13 GFF6600 Sulfur carrier protein FdhD -0.44
    14 GFF2521 FIG00931781: hypothetical protein -0.43
    15 GFF4607 Putative DNA methylase -0.43
    16 GFF4772 D-mannose isomerase (EC 5.3.1.7) -0.43
    17 GFF5284 RNA polymerase ECF-type sigma factor -0.42
    18 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A -0.42
    19 GFF5020 Tripartite tricarboxylate transporter TctB family -0.41
    20 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily -0.41

    Or look for positive cofitness