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  • Negative cofitness for GFF3609 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5056 Fumarylacetoacetase (EC 3.7.1.2) -0.59
    2 GFF4874 Plasmid replication initiator protein -0.56
    3 GFF3093 FIG138056: a glutathione-dependent thiol reductase -0.54
    4 GFF297 FIG00978250: hypothetical protein -0.52
    5 GFF6079 hypothetical protein -0.50
    6 GFF1530 Nucleoside-diphosphate-sugar epimerases -0.50
    7 GFF2483 Urease alpha subunit (EC 3.5.1.5) -0.49
    8 GFF6680 Aspartate ammonia-lyase (EC 4.3.1.1) -0.49
    9 GFF4857 benzoate MFS transporter BenK -0.49
    10 GFF4380 Transcriptional regulator, Xre family -0.49
    11 GFF6200 integral membrane sensor signal transduction histidine kinase -0.48
    12 GFF3862 hypothetical protein -0.47
    13 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) -0.47
    14 GFF2102 no description -0.47
    15 GFF2197 Type I secretion system ATPase, LssB family LapB -0.47
    16 GFF6905 Chloride channel protein -0.47
    17 GFF3185 SAM-dependent methyltransferase -0.46
    18 GFF87 no description -0.45
    19 GFF1571 Transcriptional regulator, LysR family -0.45
    20 GFF5776 Gluconokinase (EC 2.7.1.12) -0.45

    Or look for positive cofitness