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  • Negative cofitness for GFF3601 from Variovorax sp. SCN45

    Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily
    SEED: small molecule metabolism; degradation; amines
    KEGG:

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2757 hypothetical protein -0.53
    2 GFF3581 Transcriptional regulator, ArsR family -0.45
    3 GFF6262 Transcriptional regulator PhnF -0.44
    4 GFF4181 hypothetical protein -0.44
    5 GFF5360 Putative transmembrane protein -0.43
    6 GFF3936 no description -0.41
    7 GFF2251 no description -0.38
    8 GFF518 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains -0.38
    9 GFF6243 Ku domain protein -0.38
    10 GFF1421 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.38
    11 GFF4595 Transcriptional regulator -0.38
    12 GFF3312 Sensory histidine kinase CreC of two-component signal transduction system CreBC -0.37
    13 GFF5101 Dihydroxy-acid dehydratase (EC 4.2.1.9) -0.37
    14 GFF5249 Protein YhfA -0.37
    15 GFF5959 Putative amidase R03093 -0.36
    16 GFF2101 no description -0.36
    17 GFF1195 iron-sulphur protein -0.36
    18 GFF5917 T6SS component TssB (ImpB/VipA) -0.36
    19 GFF6172 Na(+) H(+) antiporter subunit C -0.35
    20 GFF2893 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) -0.35

    Or look for positive cofitness