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  • Negative cofitness for GFF360 from Variovorax sp. SCN45

    Putative transporter
    SEED: putative transporter

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3587 KEGG: putative spermidine/putrescine transport system ATP-binding protein -0.55
    2 GFF6731 Nucleoside ABC transporter, permease protein 1 -0.52
    3 GFF5794 Polyphosphate kinase 2 (EC 2.7.4.1) -0.50
    4 GFF3782 hypothetical protein -0.50
    5 GFF2368 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) -0.50
    6 GFF7241 no description -0.47
    7 GFF3818 hypothetical protein -0.46
    8 GFF4576 BUG/TctC family periplasmic protein -0.46
    9 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl -0.46
    10 GFF3403 Benzoate catabolism regulator with shikimate kinase domain -0.45
    11 GFF2900 Subtilisin-like serine proteases -0.45
    12 GFF5439 FIG00932072: hypothetical protein -0.45
    13 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain -0.45
    14 GFF3182 Cyclopropane-fatty-acyl-phospholipid synthase-like protein, clusters with FIG005069 -0.45
    15 GFF1707 no description -0.45
    16 GFF2939 hypothetical protein -0.45
    17 GFF6442 Aldehyde dehydrogenase (EC 1.2.1.3) -0.45
    18 GFF4138 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.44
    19 GFF5714 no description -0.44
    20 GFF2978 Aromatic ring-cleaving dioxygenase -0.44

    Or look for positive cofitness