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  • Negative cofitness for GFF3598 from Variovorax sp. SCN45

    TRAP-type C4-dicarboxylate transport system, periplasmic component
    SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4527 Transcriptional regulator, GntR family -0.57
    2 GFF6640 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.56
    3 GFF1656 hypothetical protein -0.56
    4 GFF5266 Transaldolase (EC 2.2.1.2) -0.56
    5 GFF2014 hypothetical protein -0.56
    6 GFF2824 TonB-dependent hemin, ferrichrome receptor -0.56
    7 GFF5064 Exonuclease SbcC -0.53
    8 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) -0.52
    9 GFF5996 BUG/TctC family periplasmic protein -0.51
    10 GFF4904 hypothetical protein -0.50
    11 GFF5299 TonB-dependent receptor -0.49
    12 GFF2038 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) -0.49
    13 GFF3307 FIG01161751: hypothetical protein -0.49
    14 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) -0.49
    15 GFF5868 hypothetical protein -0.49
    16 GFF4858 Transposase -0.49
    17 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) -0.48
    18 GFF1268 FIG022199: FAD-binding protein -0.48
    19 GFF5410 Adenylate cyclase (EC 4.6.1.1) -0.48
    20 GFF6982 hypothetical protein -0.48

    Or look for positive cofitness