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  • Negative cofitness for PS417_18395 from Pseudomonas simiae WCS417

    D-ribose ABC transporter, permease component RbsC (from data)
    Original annotation: ABC transporter permease
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: ribose transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_19635 lipid kinase -0.29
    2 PS417_03930 thymidine phosphorylase -0.26
    3 PS417_20585 chemotaxis protein -0.26
    4 PS417_00630 nitrate ABC transporter substrate-binding protein -0.26
    5 PS417_00625 taurine dioxygenase -0.23
    6 PS417_19625 histidine kinase -0.23
    7 PS417_07095 histidine kinase -0.21
    8 PS417_19630 LuxR family transcriptional regulator -0.20
    9 PS417_02210 diguanylate cyclase -0.20
    10 PS417_19610 molybdenum cofactor sulfurase -0.20
    11 PS417_24705 D-alanyl-D-alanine carboxypeptidase -0.20
    12 PS417_19615 chemotaxis protein CheW -0.20
    13 PS417_19585 acyl-CoA dehydrogenase -0.20
    14 PS417_23580 peptidylprolyl isomerase -0.19
    15 PS417_09645 TonB-dependent receptor -0.19
    16 PS417_26050 response regulator -0.19
    17 PS417_18245 hypothetical protein -0.18
    18 PS417_02815 urea ABC transporter ATP-binding protein -0.18
    19 PS417_09640 capsular biosynthesis protein -0.18
    20 PS417_08585 ATPase AAA -0.18

    Or look for positive cofitness