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  • Negative cofitness for GFF3559 from Variovorax sp. SCN45

    no description

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF112 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.59
    2 GFF4459 Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) -0.58
    3 GFF5148 Taurine ABC transporter, substrate-binding protein TauA -0.58
    4 GFF6112 Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) -0.57
    5 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) -0.56
    6 GFF6350 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA -0.56
    7 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) -0.56
    8 GFF4296 hypothetical protein -0.56
    9 GFF1186 Ferrichrome-iron receptor -0.54
    10 GFF1397 TRAP-type C4-dicarboxylate transport system, large permease component -0.53
    11 GFF6837 BUG/TctC family periplasmic protein -0.53
    12 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.53
    13 GFF5683 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.53
    14 GFF5709 no description -0.53
    15 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) -0.53
    16 GFF1042 Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18) -0.53
    17 GFF1207 no description -0.52
    18 GFF4647 no description -0.52
    19 GFF6217 hypothetical protein -0.51
    20 GFF6171 Na(+) H(+) antiporter subunit D -0.50

    Or look for positive cofitness