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  • Negative cofitness for GFF3556 from Sphingobium sp. HT1-2

    Gene Transfer Agent terminase protein
    SEED: Gene Transfer Agent terminase protein

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2438 Carbon-nitrogen hydrolase -0.80
    2 GFF110 Glutamate racemase (EC 5.1.1.3) -0.77
    3 GFF362 Sensory box/GGDEF family protein -0.75
    4 GFF2319 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like -0.74
    5 GFF60 Pyruvate,phosphate dikinase (EC 2.7.9.1) -0.73
    6 GFF348 Capsular polysaccharide export system protein KpsS -0.73
    7 GFF3691 RNA polymerase ECF-type sigma factor -0.71
    8 GFF4557 hypothetical protein -0.71
    9 GFF1195 4-hydroxyproline epimerase (EC 5.1.1.8) -0.70
    10 GFF4093 SSU rRNA ## 16S rRNA, small subunit ribosomal RNA -0.70
    11 GFF1166 hypothetical protein -0.69
    12 GFF1921 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) -0.69
    13 GFF471 Uncharacterized amino acid permease, GabP family -0.68
    14 GFF2549 TonB-dependent receptor -0.68
    15 GFF1217 Cellulose synthase operon protein C -0.68
    16 GFF3248 putative transglycosylase associated gene -0.68
    17 GFF4501 Hydrolase, alpha/beta fold family -0.68
    18 GFF3027 HoxN/HupN/NixA family nickel/cobalt transporter -0.68
    19 GFF2471 Polyphosphate kinase (EC 2.7.4.1) -0.68
    20 GFF5035 Fructokinase (EC 2.7.1.4) -0.67

    Or look for positive cofitness