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  • Negative cofitness for GFF3553 from Variovorax sp. SCN45

    FOG: TPR repeat
    SEED: FOG: TPR repeat

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6421 ATPase, AAA family -0.62
    2 GFF1788 hypothetical protein -0.61
    3 GFF665 hypothetical protein -0.61
    4 GFF7012 Taurine ABC transporter, ATP-binding protein TauB -0.61
    5 GFF1139 Domain of unknown function / Efflux ABC transporter, permease protein -0.60
    6 GFF4632 Glycosyl transferase, family 2 -0.60
    7 GFF4638 CDP-glucose 4,6-dehydratase (EC 4.2.1.45) -0.59
    8 GFF5318 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) -0.59
    9 GFF4581 hypothetical protein -0.59
    10 GFF1515 Flagellar hook-length control protein FliK -0.58
    11 GFF5823 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) -0.58
    12 GFF4907 NAD(P) transhydrogenase C-domain of subunit alpha (EC 1.6.1.2) -0.58
    13 GFF6191 Aldehyde dehydrogenase (EC 1.2.1.3) -0.57
    14 GFF4637 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase (EC 4.2.1.-) -0.57
    15 GFF5331 Transposase and inactivated derivatives -0.56
    16 GFF6194 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.56
    17 GFF4829 Isocitrate lyase (EC 4.1.3.1) -0.56
    18 GFF4109 Aspartate aminotransferase (EC 2.6.1.1) -0.56
    19 GFF6305 Malate synthase G (EC 2.3.3.9) -0.56
    20 GFF931 Methylmalonyl-CoA mutase (EC 5.4.99.2) / B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2) -0.56

    Or look for positive cofitness