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  • Negative cofitness for GFF3533 from Variovorax sp. SCN45

    Two-component system sensor histidine kinase
    KEGG: two-component system, OmpR family, sensor histidine kinase QseC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3395 Benzoate ABC transporter, permease protein 2 -0.51
    2 GFF2688 Glutamine ABC transporter, substrate-binding protein GlnH -0.48
    3 GFF2479 hypothetical protein -0.47
    4 GFF3297 hypothetical protein Ajs_0007 -0.46
    5 GFF7392 BUG/TctC family periplasmic protein -0.46
    6 GFF2417 putative amidase -0.46
    7 GFF2248 Transcriptional regulatory protein RtcR -0.46
    8 GFF2776 hypothetical protein -0.45
    9 GFF7049 hypothetical protein -0.45
    10 GFF130 hypothetical protein -0.45
    11 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl -0.45
    12 GFF1238 Two-component transcriptional response regulator, OmpR family -0.44
    13 GFF6866 hypothetical protein -0.44
    14 GFF5700 UPF0758 family protein -0.44
    15 GFF5353 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) -0.44
    16 GFF4811 FIG074102: hypothetical protein -0.44
    17 GFF663 Transcriptional regulator, Crp/Fnr family -0.44
    18 GFF4107 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.43
    19 GFF6621 Mobile element protein -0.43
    20 GFF3827 UPF0118 membrane protein SMc00793 -0.42

    Or look for positive cofitness