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  • Negative cofitness for GFF352 from Sphingobium sp. HT1-2

    Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
    SEED: Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
    KEGG: 3-oxoacid CoA-transferase subunit B

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF987 Phage shock protein A @ Suppressor of sigma54-dependent transcription, PspA-like -0.84
    2 GFF3284 ABC transporter -0.80
    3 GFF4512 MCP methyltransferase, CheR-type -0.76
    4 GFF2367 Protein translocase membrane subunit SecG -0.76
    5 GFF3353 hypothetical protein -0.75
    6 GFF4603 hypothetical protein -0.74
    7 GFF799 hypothetical protein -0.73
    8 GFF1006 hypothetical protein -0.73
    9 GFF1944 hypothetical protein -0.72
    10 GFF1889 Transcriptional regulator, AcrR family -0.72
    11 GFF2965 hypothetical protein -0.71
    12 GFF3847 Tas protein, an NADP(H)-dependent aldo-keto reductase -0.71
    13 GFF3011 Di-tripeptide/cation symporter -0.71
    14 GFF5151 RNA polymerase ECF-type sigma factor -0.71
    15 GFF3825 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) -0.70
    16 GFF521 hypothetical protein -0.69
    17 GFF2259 '5'-nucleotidase SurE (EC 3.1.3.5)' transl_table=11 -0.69
    18 GFF4633 Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldA -0.69
    19 GFF2245 Thioesterase superfamily -0.68
    20 GFF552 hypothetical protein -0.68

    Or look for positive cofitness