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  • Negative cofitness for GFF3503 from Variovorax sp. SCN45

    Subclass B3 beta-lactamase (EC 3.5.2.6)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6359 FIG01219766: hypothetical protein -0.60
    2 GFF2689 Protein containing transglutaminase-like domain, putative cysteine protease -0.52
    3 GFF7327 FIG074102: hypothetical protein -0.50
    4 GFF3863 RNA polymerase sigma factor RpoE -0.50
    5 GFF4913 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.49
    6 GFF4427 hypothetical protein -0.48
    7 GFF4633 no description -0.48
    8 GFF1023 UPF0311 protein RPA1785 -0.47
    9 GFF1708 no description -0.47
    10 GFF6924 protein of unknown function DUF485 -0.47
    11 GFF7150 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) -0.47
    12 GFF5193 Galactofuranose ABC transporter, substrate-binding protein -0.47
    13 GFF7099 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) -0.46
    14 GFF3244 Spermidine synthase N-terminal extension / Spermidine synthase (EC 2.5.1.16) -0.46
    15 GFF2001 Putative phosphatase YieH -0.46
    16 GFF1621 Phosphonoacetaldehyde dehydrogenase (NAD+) -0.45
    17 GFF6368 T6SS lysozyme-like component TssE -0.45
    18 GFF4534 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like -0.45
    19 GFF4277 Small subunit naph/bph dioxygenase -0.45
    20 GFF3463 Urea ABC transporter, permease protein UrtB -0.44

    Or look for positive cofitness