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  • Negative cofitness for GFF3493 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: FIG000557: hypothetical protein co-occurring with RecR

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) -0.55
    2 GFF4175 FMN reductase (NADH) (EC 1.5.1.42) -0.53
    3 GFF1526 putative transmembrane sensor -0.52
    4 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component -0.52
    5 GFF3625 Ferredoxin, 2Fe-2S -0.52
    6 GFF2354 FIG00555615: hypothetical protein -0.51
    7 GFF2984 Adenosine deaminase (EC 3.5.4.4) -0.51
    8 GFF2267 Integral membrane protein -0.50
    9 GFF1030 Ferredoxin reductase -0.50
    10 GFF6892 Uncharacterized glutathione S-transferase-like protein -0.48
    11 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) -0.48
    12 GFF649 no description -0.46
    13 GFF399 3'-to-5' exoribonuclease RNase R -0.46
    14 GFF490 Cell division trigger factor (EC 5.2.1.8) -0.45
    15 GFF3619 no description -0.45
    16 GFF151 FIG00460174: hypothetical protein -0.45
    17 GFF3496 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.45
    18 GFF5407 Membrane protein TerC, possibly involved in tellurium resistance -0.44
    19 GFF3621 Magnesium and cobalt transport protein CorA -0.44
    20 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) -0.44

    Or look for positive cofitness