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  • Negative cofitness for GFF3484 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: ABC transporter substrate-binding protein
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF733 no description -0.45
    2 GFF2942 Epoxide hydrolase (EC 3.3.2.9) -0.44
    3 GFF583 Tripartite tricarboxylate transporter TctB family -0.42
    4 GFF5785 FIG00931285: hypothetical protein -0.39
    5 GFF1330 UPF0061 protein YdiU -0.38
    6 GFF5816 no description -0.38
    7 GFF7082 TnpA transposase -0.38
    8 GFF5015 Putative stomatin/prohibitin-family membrane protease subunit aq_911 -0.38
    9 GFF359 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) -0.38
    10 GFF4148 hypothetical protein -0.37
    11 GFF6934 Universal stress protein family -0.37
    12 GFF1573 Oxidoreductase, short-chain dehydrogenase/reductase family -0.37
    13 GFF7358 Phenylacetate ABC transporter, permease protein 2 -0.36
    14 GFF1650 NmrA-like -0.36
    15 GFF5948 hypothetical protein -0.36
    16 GFF591 Renalase (EC 1.6.3.5), oxidases 1,2-dihydro- and 1,6-dihydro- beta-NAD(P)H isomers back to NAD(P) -0.36
    17 GFF3655 no description -0.36
    18 GFF5814 Rhodanese-related sulfurtransferase -0.36
    19 GFF1963 Transcriptional regulator, AsnC family -0.36
    20 GFF6316 no description -0.36

    Or look for positive cofitness