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  • Negative cofitness for PS417_17835 from Pseudomonas simiae WCS417

    2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
    SEED: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
    KEGG: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12830 LysR family transcriptional regulator -0.25
    2 PS417_12990 nucleoside hydrolase -0.23
    3 PS417_24155 ATP-binding protein -0.21
    4 PS417_07330 4-hydroxybenzoate 3-monooxygenase -0.20
    5 PS417_12635 alkanesulfonate monooxygenase -0.20
    6 PS417_22230 class I peptide chain release factor -0.20
    7 PS417_19400 amino acid transporter LysE -0.20
    8 PS417_15235 short-chain dehydrogenase -0.19
    9 PS417_15585 DNA repair nucleotidyltransferase -0.19
    10 PS417_28535 TonB-dependent receptor -0.19
    11 PS417_11720 class V aminotransferase -0.19
    12 PS417_01605 phosphoglycerate mutase -0.19
    13 PS417_00620 GntR family transcriptional regulator -0.19
    14 PS417_20125 phosphoribosylglycinamide formyltransferase -0.19
    15 PS417_01435 hypothetical protein -0.19
    16 PS417_12145 acetoacetyl-CoA synthetase -0.18
    17 PS417_27195 N-acetylglutamate synthase -0.18
    18 PS417_17615 leucyl-tRNA synthetase -0.18
    19 PS417_03705 2-alkenal reductase -0.18
    20 PS417_09900 hypothetical protein -0.18

    Or look for positive cofitness