• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_17830 from Pseudomonas simiae WCS417

    4-hydroxyphenylacetate isomerase
    SEED: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
    KEGG: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_26775 thiazole synthase -0.24
    2 PS417_17630 RNA polymerase sigma factor -0.22
    3 PS417_24600 hydrogenase -0.22
    4 PS417_28050 hypothetical protein -0.21
    5 PS417_02355 thiamine biosynthesis protein ThiC -0.20
    6 PS417_10645 magnesium ABC transporter ATPase -0.20
    7 PS417_14600 bleomycin resistance protein -0.20
    8 PS417_09885 hypothetical protein -0.19
    9 PS417_19915 serine/threonine protein phosphatase -0.19
    10 PS417_03995 Fe(II)-dependent oxygenase -0.19
    11 PS417_24605 thiamine-phosphate pyrophosphorylase -0.19
    12 PS417_21105 aminodeoxychorismate synthase -0.18
    13 PS417_05710 hypothetical protein -0.18
    14 PS417_24675 lipoyl synthase -0.17
    15 PS417_07905 hypothetical protein -0.17
    16 PS417_22755 acriflavine resistance protein B -0.17
    17 PS417_27785 phosphoglucomutase -0.17
    18 PS417_06990 hypothetical protein -0.17
    19 PS417_27350 calcium transporter ChaC -0.17
    20 PS417_01190 diguanylate phosphodiesterase -0.17

    Or look for positive cofitness