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  • Negative cofitness for PS417_17735 from Pseudomonas simiae WCS417

    LacI family transcriptional regulator
    SEED: Xylose ABC transporter, periplasmic xylose-binding protein XylF
    KEGG: ribose transport system substrate-binding protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_09615 glycosyl transferase family 1 -0.24
    2 PS417_03115 pilus assembly protein -0.22
    3 PS417_09585 acetyltransferase -0.22
    4 PS417_26125 glutathione S-transferase -0.21
    5 PS417_18970 hypothetical protein -0.21
    6 PS417_02870 TonB-dependent receptor -0.20
    7 PS417_08655 pseudouridine synthase -0.19
    8 PS417_14960 ATPase -0.19
    9 PS417_18475 Pyrrolidone-carboxylate peptidase -0.18
    10 PS417_06365 RNA polymerase sigma factor -0.18
    11 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase -0.18
    12 PS417_09620 lipopolysaccharide biosynthesis protein -0.18
    13 PS417_14965 transcriptional regulator -0.18
    14 PS417_14945 beta-lactamase -0.18
    15 PS417_11315 hemagglutinin -0.18
    16 PS417_09595 membrane protein -0.18
    17 PS417_02145 potassium transporter KefA -0.17
    18 PS417_12835 GNAT family acetyltransferase -0.17
    19 PS417_19775 chemotaxis protein CheY -0.17
    20 PS417_22020 pili assembly chaperone -0.17

    Or look for positive cofitness