• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF3458 from Sphingobium sp. HT1-2

    3-isopropylmalate dehydrogenase (EC 1.1.1.85)
    SEED: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
    KEGG: 3-isopropylmalate dehydrogenase

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF967 Nucleoside-diphosphate-sugar epimerases -0.84
    2 GFF4055 ATP-dependent Clp protease ATP-binding subunit ClpX -0.80
    3 GFF2792 hypothetical protein -0.80
    4 GFF4227 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) -0.80
    5 GFF240 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.78
    6 GFF4438 Plasmid replication protein RepA -0.77
    7 GFF1519 Protein containing domains DUF403 -0.77
    8 GFF4171 Phosphoenolpyruvate synthase regulatory protein -0.77
    9 GFF3480 ATP-dependent RNA helicase Atu1833 -0.75
    10 GFF2770 hypothetical protein -0.75
    11 GFF1520 Protein containing domains DUF404, DUF407 -0.75
    12 GFF1714 putative membrane protein -0.72
    13 GFF2701 Cobalt/zinc/cadmium resistance protein CzcD -0.72
    14 GFF1715 hypothetical protein -0.72
    15 GFF5247 hypothetical protein -0.72
    16 GFF2767 Transcriptional regulator, AcrR family -0.71
    17 GFF2597 Quinohemoprotein amine dehydrogenase gamma subunit (EC 1.4.99.-) -0.70
    18 GFF3819 PTS system permease (IIAMan), nitrogen regulatory IIA protein -0.70
    19 GFF3352 TonB-dependent receptor -0.69
    20 GFF3473 ATP synthase protein I -0.69

    Or look for positive cofitness