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  • Negative cofitness for GFF3456 from Sphingobium sp. HT1-2

    pyridoxal-phosphate dependent enzyme family protein
    SEED: Threonine dehydratase (EC 4.3.1.19)
    KEGG: threonine dehydratase

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4134 hypothetical protein -0.76
    2 GFF3320 Transcriptional regulator, AcrR family -0.74
    3 GFF1944 hypothetical protein -0.73
    4 GFF4614 Transcriptional regulator, AcrR family -0.71
    5 GFF2254 DksA family protein PA5536 (no Zn-finger) -0.71
    6 GFF21 hypothetical protein -0.71
    7 GFF469 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) -0.70
    8 GFF750 Ribosomal silencing factor RsfA -0.70
    9 GFF1249 Capsular polysaccharide biosynthesis protein -0.70
    10 GFF1060 'NADH pyrophosphatase (EC 3.6.1.22), decaps 5'-NAD modified RNA' transl_table=11 -0.69
    11 GFF4202 hypothetical protein -0.67
    12 GFF3863 putative oxidoreductase, nitronate monooxygenase family -0.66
    13 GFF4735 HlyD family secretion protein -0.66
    14 GFF241 hypothetical protein -0.65
    15 GFF4922 Oxidoreductase, short-chain dehydrogenase/reductase family -0.65
    16 GFF4190 [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme -0.65
    17 GFF4760 tRNA-modifying protein YgfZ -0.65
    18 GFF5140 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) -0.64
    19 GFF4272 hypothetical protein -0.63
    20 GFF51 hypothetical protein -0.63

    Or look for positive cofitness