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  • Negative cofitness for PS417_17630 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_05475 arginase -0.24
    2 PS417_17830 4-hydroxyphenylacetate isomerase -0.22
    3 PS417_20975 protein kinase -0.22
    4 PS417_14845 endoribonuclease L-PSP -0.22
    5 PS417_22050 ribonuclease BN -0.21
    6 PS417_17285 hypothetical protein -0.20
    7 PS417_25695 peroxiredoxin -0.20
    8 PS417_19155 DSBA oxidoreductase -0.20
    9 PS417_16120 transcriptional regulator -0.19
    10 PS417_16500 arginyl-tRNA-protein transferase -0.19
    11 PS417_23500 D-erythro-7,8-dihydroneopterin triphosphate epimerase -0.18
    12 PS417_11695 peptide synthase -0.18
    13 PS417_19175 toxin -0.17
    14 PS417_05270 3-oxoacyl-ACP reductase -0.17
    15 PS417_13455 alkaline proteinase inhibitor -0.17
    16 PS417_10785 hypothetical protein -0.17
    17 PS417_15180 acyl dehydratase -0.17
    18 PS417_28350 fatty acid methyltransferase -0.17
    19 PS417_03065 peptidase A24 -0.17
    20 PS417_27410 outer membrane usher protein -0.17

    Or look for positive cofitness