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  • Negative cofitness for GFF3442 from Variovorax sp. SCN45

    RidA/YER057c/UK114 superfamily protein
    SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5935 VgrG protein -0.54
    2 GFF6342 Mobile element protein -0.54
    3 GFF7124 Mobile element protein -0.52
    4 GFF5857 Fe2+-dicitrate sensor, membrane component -0.51
    5 GFF5999 DNA polymerase IV (EC 2.7.7.7) -0.51
    6 GFF900 hypothetical protein -0.49
    7 GFF530 no description -0.49
    8 GFF4498 Exoenzymes regulatory protein AepA precursor -0.48
    9 GFF3731 Glutathione S-transferase -0.48
    10 GFF4504 FIG00953527: hypothetical protein -0.47
    11 GFF5542 no description -0.47
    12 GFF6802 Uncharacterized MFS-type transporter -0.46
    13 GFF3379 Aromatic--CoA ligase -0.45
    14 GFF77 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.45
    15 GFF1312 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.45
    16 GFF6537 hypothetical protein -0.44
    17 GFF5652 FIG00014764: hypothetical protein -0.44
    18 GFF3514 no description -0.44
    19 GFF463 Malonyl-CoA decarboxylase (EC 4.1.1.9) -0.44
    20 GFF4119 no description -0.43

    Or look for positive cofitness