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  • Negative cofitness for GFF3436 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7080 no description -0.57
    2 GFF895 Putative transcriptional regulatory protein -0.51
    3 GFF1615 Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1) -0.50
    4 GFF2866 Uncharacterized MFS-type transporter -0.49
    5 GFF686 porin, Gram-negative type -0.49
    6 GFF159 Acyl-CoA dehydrogenase/oxidase domain protein -0.48
    7 GFF4792 PhnB protein -0.47
    8 GFF7157 Peptidase M20D, amidohydrolase -0.46
    9 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) -0.46
    10 GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.45
    11 GFF1849 FIG00347667: hypothetical protein -0.44
    12 GFF3181 FIG005069: Hypothetical protein -0.44
    13 GFF1808 no description -0.44
    14 GFF731 Transcriptional regulator, ArsR family -0.43
    15 GFF4143 Dihydrofolate reductase (EC 1.5.1.3) -0.43
    16 GFF1609 2-haloalkanoic acid dehalogenase (EC 3.8.1.2) -0.43
    17 GFF3956 no description -0.42
    18 GFF7145 Transcriptional regulator, GntR family -0.42
    19 GFF2372 Similar to citrate lyase beta chain, 3 -0.42
    20 GFF1812 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.42

    Or look for positive cofitness