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  • Negative cofitness for PS417_17565 from Pseudomonas simiae WCS417

    branched-chain amino acid aminotransferase
    SEED: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
    KEGG: branched-chain amino acid aminotransferase

    Computing cofitness values with 554 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12895 pyruvate dehydrogenase -0.36
    2 PS417_09620 lipopolysaccharide biosynthesis protein -0.28
    3 PS417_15695 molybdenum cofactor biosynthesis protein A -0.28
    4 PS417_08425 acetyltransferase -0.28
    5 PS417_26320 ABC transporter permease -0.28
    6 PS417_20955 secretion protein -0.28
    7 PS417_05140 dipicolinate synthase -0.28
    8 PS417_26875 histidine kinase -0.27
    9 PS417_26950 LysR family transcriptional regulator -0.27
    10 PS417_06365 RNA polymerase sigma factor -0.27
    11 PS417_09640 capsular biosynthesis protein -0.26
    12 PS417_01505 gamma-aminobutyrate transporter -0.26
    13 PS417_19180 sugar-binding protein -0.25
    14 PS417_20175 LysR family transcriptional regulator -0.24
    15 PS417_00450 chemotaxis protein CheY -0.24
    16 PS417_07900 hypothetical protein -0.24
    17 PS417_16160 ABC transporter substrate-binding protein -0.24
    18 PS417_09635 mannose-1-phosphate guanylyltransferase -0.23
    19 PS417_15715 nitrate reductase -0.23
    20 PS417_09585 acetyltransferase -0.23

    Or look for positive cofitness