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  • Negative cofitness for PS417_17550 from Pseudomonas simiae WCS417

    branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data)
    Original annotation: 2-oxoisovalerate dehydrogenase
    SEED: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
    KEGG: 2-oxoisovalerate dehydrogenase E1 component, beta subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12895 pyruvate dehydrogenase -0.28
    2 PS417_15695 molybdenum cofactor biosynthesis protein A -0.25
    3 PS417_08425 acetyltransferase -0.25
    4 PS417_04890 ATP-dependent RNA helicase RhlB -0.20
    5 PS417_00620 GntR family transcriptional regulator -0.20
    6 PS417_01505 gamma-aminobutyrate transporter -0.19
    7 PS417_09640 capsular biosynthesis protein -0.19
    8 PS417_25270 NrdR family transcriptional regulator -0.19
    9 PS417_15710 nitrate reductase -0.19
    10 PS417_15715 nitrate reductase -0.19
    11 PS417_21040 sulfurylase -0.18
    12 PS417_02555 exoribonuclease R -0.18
    13 PS417_21130 nitrate reductase -0.18
    14 PS417_20360 serine/threonine protein phosphatase -0.18
    15 PS417_20165 hypothetical protein -0.18
    16 PS417_13450 serine 3-dehydrogenase -0.18
    17 PS417_19545 peptide synthase -0.18
    18 PS417_27175 NAD(P)H-dependent FMN reductase -0.17
    19 PS417_00450 chemotaxis protein CheY -0.17
    20 PS417_15690 ribonucleoside-triphosphate reductase -0.17

    Or look for positive cofitness