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  • Negative cofitness for GFF3430 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Glycine cleavage system transcriptional activator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2341 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.51
    2 GFF4216 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.48
    3 GFF4414 Conjugative transfer protein TrbB -0.47
    4 GFF6902 Oxidoreductase, short-chain dehydrogenase/reductase family -0.47
    5 GFF4107 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.46
    6 GFF202 Transcriptional regulator, LysR family -0.45
    7 GFF2863 no description -0.43
    8 GFF5713 Flagellar basal-body P-ring formation protein FlgA -0.43
    9 GFF5821 no description -0.42
    10 GFF3608 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.41
    11 GFF1548 Tripartite tricarboxylate transporter TctA family -0.41
    12 GFF3121 hypothetical protein -0.41
    13 GFF4663 no description -0.41
    14 GFF5752 Flagellin FliC -0.41
    15 GFF5141 no description -0.41
    16 GFF1750 BUG/TctC family periplasmic protein -0.40
    17 GFF5352 Split AAA-ATPase protein PA0787 -0.40
    18 GFF1913 Short-chain dehydrogenase -0.39
    19 GFF4430 hypothetical protein -0.39
    20 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) -0.39

    Or look for positive cofitness