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  • Negative cofitness for GFF3430 from Sphingobium sp. HT1-2

    Glucoamylase (EC 3.2.1.3)
    SEED: Glucoamylase (EC 3.2.1.3)

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1145 RNA-binding protein Hfq / RNA-binding protein Hfq -0.82
    2 GFF1085 Phage integrase -0.73
    3 GFF4752 Transcriptional regulator, MerR family -0.73
    4 GFF4180 long chain fatty acid transport protein -0.73
    5 GFF3229 hypothetical protein -0.73
    6 GFF1090 Type IV secretory pathway, VirD2 components (relaxase) -0.72
    7 GFF889 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) -0.71
    8 GFF2176 hypothetical protein -0.71
    9 GFF4314 IncF plasmid conjugative transfer pilus assembly protein TraK -0.70
    10 GFF4648 hypothetical protein -0.69
    11 GFF4380 putative inner membrane protein -0.69
    12 GFF582 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) -0.69
    13 GFF4106 PDZ domain family protein -0.68
    14 GFF4633 Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldA -0.68
    15 GFF337 LemA family protein -0.68
    16 GFF957 Transcriptional regulator, LysR family -0.68
    17 GFF2075 hypothetical protein -0.68
    18 GFF847 hypothetical protein -0.67
    19 GFF4512 MCP methyltransferase, CheR-type -0.67
    20 GFF2832 Maltodextrin glucosidase (EC 3.2.1.20) -0.67

    Or look for positive cofitness