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  • Negative cofitness for PS417_17545 from Pseudomonas simiae WCS417

    2-oxoisovalerate dehydrogenase
    SEED: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
    KEGG: 2-oxoisovalerate dehydrogenase E1 component, alpha subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12895 pyruvate dehydrogenase -0.40
    2 PS417_01505 gamma-aminobutyrate transporter -0.36
    3 PS417_20165 hypothetical protein -0.26
    4 PS417_08425 acetyltransferase -0.25
    5 PS417_26125 glutathione S-transferase -0.25
    6 PS417_20955 secretion protein -0.24
    7 PS417_22235 aromatic amino acid transporter -0.23
    8 PS417_28135 sodium:alanine symporter -0.23
    9 PS417_15715 nitrate reductase -0.22
    10 PS417_00620 GntR family transcriptional regulator -0.21
    11 PS417_15695 molybdenum cofactor biosynthesis protein A -0.21
    12 PS417_21130 nitrate reductase -0.21
    13 PS417_25970 diguanylate cyclase -0.20
    14 PS417_20195 sodium:solute symporter -0.20
    15 PS417_08340 type IV secretion protein Rhs -0.20
    16 PS417_15710 nitrate reductase -0.19
    17 PS417_21600 pilus assembly protein PilZ -0.19
    18 PS417_20175 LysR family transcriptional regulator -0.19
    19 PS417_05585 hypothetical protein -0.19
    20 PS417_09640 capsular biosynthesis protein -0.19

    Or look for positive cofitness