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  • Negative cofitness for GFF3429 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family
    KEGG: AraC family transcriptional regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2317 FIG015287: Zinc protease -0.61
    2 GFF313 FIG027190: Putative transmembrane protein -0.60
    3 GFF1918 hypothetical protein -0.59
    4 GFF875 no description -0.58
    5 GFF6506 DNA-binding protein HU-beta -0.58
    6 GFF761 FIG00537905: hypothetical protein -0.55
    7 GFF2590 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) -0.54
    8 GFF147 Transcriptional regulator -0.54
    9 GFF3354 FIG00537998: hypothetical protein -0.54
    10 GFF4310 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.53
    11 GFF5819 no description -0.53
    12 GFF5436 Hypothetical protein COG3496 -0.52
    13 GFF6011 putative decarboxylase -0.51
    14 GFF3244 Spermidine synthase N-terminal extension / Spermidine synthase (EC 2.5.1.16) -0.51
    15 GFF1054 Catechol 2,3-dioxygenase (EC 1.13.11.2) -0.50
    16 GFF2218 FIG00455441: hypothetical protein -0.50
    17 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) -0.49
    18 GFF1947 no description -0.49
    19 GFF1673 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.49
    20 GFF6849 MotA/TolQ/ExbB proton channel family protein -0.48

    Or look for positive cofitness