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  • Negative cofitness for GFF3428 from Variovorax sp. SCN45

    2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)
    SEED: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7060 BUG/TctC family periplasmic protein -0.59
    2 GFF2664 FIG002343: hypothetical protein -0.56
    3 GFF5818 Two-component transcriptional response regulator, NarL/FixJ family -0.55
    4 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) -0.53
    5 GFF5299 TonB-dependent receptor -0.53
    6 GFF7084 Mobile element protein -0.53
    7 GFF6080 Putative deoxyribonuclease YjjV -0.52
    8 GFF6788 Multicopper oxidase -0.49
    9 GFF4212 Methionine gamma-lyase (EC 4.4.1.11) -0.49
    10 GFF6574 Conjugative transfer protein TrbL -0.49
    11 GFF5662 no description -0.49
    12 GFF1687 BUG/TctC family periplasmic protein -0.49
    13 GFF2107 no description -0.48
    14 GFF5239 hypothetical protein -0.48
    15 GFF2397 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily -0.48
    16 GFF1026 Probable chromate transporter protein -0.48
    17 GFF4847 Conjugative transfer protein TrbD -0.47
    18 GFF3182 Cyclopropane-fatty-acyl-phospholipid synthase-like protein, clusters with FIG005069 -0.47
    19 GFF7211 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) -0.46
    20 GFF4903 no description -0.46

    Or look for positive cofitness