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  • Negative cofitness for GFF3424 from Variovorax sp. SCN45

    FIG00443816: hypothetical protein
    KEGG: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4279 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) -0.63
    2 GFF183 Virulence protein -0.60
    3 GFF5870 hypothetical protein -0.60
    4 GFF6037 Transcriptional regulator, Crp/Fnr family -0.60
    5 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) -0.57
    6 GFF5868 hypothetical protein -0.57
    7 GFF6730 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) -0.57
    8 GFF5410 Adenylate cyclase (EC 4.6.1.1) -0.57
    9 GFF4782 Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II) -0.57
    10 GFF2919 no description -0.56
    11 GFF5869 internalin, putative -0.56
    12 GFF3731 Glutathione S-transferase -0.56
    13 GFF6683 Efflux ABC transporter, permease protein -0.55
    14 GFF5871 hypothetical protein -0.53
    15 GFF3181 FIG005069: Hypothetical protein -0.53
    16 GFF915 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) -0.53
    17 GFF5409 FIG00576366: hypothetical protein -0.53
    18 GFF3606 Similarities with probable transcriptional regulator LumQ -0.52
    19 GFF1705 ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) / C-terminal AAA-associated domain -0.52
    20 GFF6448 Glucans biosynthesis protein D precursor -0.51

    Or look for positive cofitness