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  • Negative cofitness for GFF3417 from Sphingobium sp. HT1-2

    Protein of unknown function DUF55
    SEED: FIG006231: RNA-binding protein

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4033 hypothetical protein -0.78
    2 GFF4913 oxidoreductase, zinc-binding dehydrogenase family protein -0.73
    3 GFF3041 Transcriptional Regulator, LysR family -0.69
    4 GFF2793 Uncharacterized membrane-anchored protein -0.67
    5 GFF553 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) -0.67
    6 GFF88 Radical SAM domain protein -0.65
    7 GFF757 hypothetical protein -0.64
    8 GFF3638 putative cytochrome P450 hydroxylase -0.63
    9 GFF2414 Putative Zn-dependent protease -0.63
    10 GFF1200 Putative glycosyl hydrolase of unknown function (DUF1680) -0.63
    11 GFF4347 hypothetical protein -0.62
    12 GFF1193 Uncharacterized amino acid permease, GabP family -0.62
    13 GFF4290 Error-prone repair protein UmuD -0.61
    14 GFF4612 Oxidoreductase, short-chain dehydrogenase/reductase family -0.61
    15 GFF3100 alpha-L-arabinofuranosidase (EC 3.2.1.55) -0.57
    16 GFF1499 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) -0.57
    17 GFF4407 Mobile element protein -0.57
    18 GFF2374 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) -0.56
    19 GFF5245 Inner membrane component of tripartite multidrug resistance system -0.56
    20 GFF3700 Two-component system sensor histidine kinase -0.56

    Or look for positive cofitness