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  • Negative cofitness for GFF3413 from Variovorax sp. SCN45

    Thioredoxin reductase (EC 1.8.1.9)
    SEED: Thioredoxin reductase (EC 1.8.1.9)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) -0.62
    2 GFF3844 Transcriptional regulator, LysR family -0.60
    3 GFF1315 Cyclic di-GMP-binding protein BcsB -0.58
    4 GFF765 hypothetical protein -0.57
    5 GFF4389 Type IV secretory pathway, VirD2 components (relaxase) -0.57
    6 GFF1667 N-methylhydantoinase B (EC 3.5.2.14) -0.56
    7 GFF7272 D-glucarate permease -0.56
    8 GFF4397 hypothetical protein -0.56
    9 GFF4802 Osmotically-inducible lipoprotein OsmB -0.55
    10 GFF7323 Transcriptional response regulatory protein GlrR -0.53
    11 GFF920 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily -0.53
    12 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake -0.53
    13 GFF5840 hypothetical protein -0.53
    14 GFF6472 membrane efflux protein -0.52
    15 GFF6115 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.52
    16 GFF6647 Two-component transcriptional response regulator, LuxR family -0.52
    17 GFF7374 FIG00984748: hypothetical protein -0.52
    18 GFF3750 no description -0.52
    19 GFF6805 FIG00821908: hypothetical protein -0.51
    20 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) -0.50

    Or look for positive cofitness