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  • Negative cofitness for PS417_17460 from Pseudomonas simiae WCS417

    Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data)
    Original annotation: quinonprotein alcohol dehydrogenase
    SEED: Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8)
    KEGG: alcohol dehydrogenase (cytochrome c)

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_09610 beta-xylosidase -0.26
    2 PS417_13725 membrane protein -0.22
    3 PS417_24570 AsnC family transcriptional regulator -0.20
    4 PS417_06435 glutathione S-transferase -0.20
    5 PS417_19110 hypothetical protein -0.19
    6 PS417_12210 ABC transporter substrate-binding protein -0.19
    7 PS417_13340 hypothetical protein -0.18
    8 PS417_10275 histidine kinase -0.18
    9 PS417_14175 ArsC family transcriptional regulator -0.18
    10 PS417_04580 hypothetical protein -0.18
    11 PS417_06985 metal ABC transporter ATPase -0.18
    12 PS417_11585 LuxR family transcriptional regulator -0.17
    13 PS417_08780 ion transporter -0.17
    14 PS417_06825 hypothetical protein -0.17
    15 PS417_09620 lipopolysaccharide biosynthesis protein -0.17
    16 PS417_03350 cytochrome C peroxidase -0.17
    17 PS417_13780 integrase -0.16
    18 PS417_26535 cytochrome B561 -0.16
    19 PS417_19755 flagellar motor switch protein FliM -0.16
    20 PS417_23370 protoheme IX farnesyltransferase -0.16

    Or look for positive cofitness