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  • Negative cofitness for PS417_01735 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Histidine ABC transporter, permease protein (TC 3.A.1)
    KEGG: glycine betaine/proline transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_09620 lipopolysaccharide biosynthesis protein -0.29
    2 PS417_09635 mannose-1-phosphate guanylyltransferase -0.25
    3 PS417_04495 LITAF-like zinc ribbon domain containing protein -0.25
    4 PS417_26775 thiazole synthase -0.25
    5 PS417_09610 beta-xylosidase -0.24
    6 PS417_10645 magnesium ABC transporter ATPase -0.24
    7 PS417_24595 histidine kinase -0.23
    8 PS417_09625 sugar ABC transporter substrate-binding protein -0.22
    9 PS417_09605 glycosyl transferase -0.22
    10 PS417_28070 phosphate ABC transporter ATP-binding protein -0.21
    11 PS417_21735 ABC transporter for L-Arginine, permease component 2 (from data) -0.21
    12 PS417_08985 histidine kinase -0.21
    13 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase -0.20
    14 PS417_09615 glycosyl transferase family 1 -0.20
    15 PS417_03990 ligand-gated channel protein -0.20
    16 PS417_20415 reverse transcriptase -0.20
    17 PS417_24600 hydrogenase -0.19
    18 PS417_09830 6-carboxy-5,6,7,8-tetrahydropterin synthase -0.19
    19 PS417_24885 transcriptional regulator -0.19
    20 PS417_09865 hypothetical protein -0.19

    Or look for positive cofitness