• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF3403 from Variovorax sp. SCN45

    Benzoate catabolism regulator with shikimate kinase domain
    SEED: Regulatory protein of benzoate catabolism
    KEGG: shikimate kinase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6272 no description -0.51
    2 GFF494 RND efflux system, membrane fusion protein -0.50
    3 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) -0.48
    4 GFF3938 Intracellular protease -0.48
    5 GFF4529 Probable signal peptide protein -0.47
    6 GFF5860 no description -0.47
    7 GFF267 no description -0.46
    8 GFF3351 FIG00458971: hypothetical protein -0.46
    9 GFF360 Putative transporter -0.45
    10 GFF6392 hypothetical protein -0.45
    11 GFF2576 6-carboxy-5,6,7,8-tetrahydropterin synthase (EC 4.1.2.50) -0.45
    12 GFF3247 FIG027190: Putative transmembrane protein -0.45
    13 GFF5947 Large extracellular alpha-helical protein -0.44
    14 GFF7323 Transcriptional response regulatory protein GlrR -0.43
    15 GFF3748 KEGG: dihydrodipicolinate synthase -0.43
    16 GFF1317 no description -0.43
    17 GFF5381 Transcriptional regulator, LysR family -0.43
    18 GFF6517 Cation transport protein ChaC -0.42
    19 GFF6679 hypothetical protein -0.42
    20 GFF6286 Probable signal peptide protein -0.42

    Or look for positive cofitness