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  • Negative cofitness for PS417_17375 from Pseudomonas simiae WCS417

    C4-dicarboxylate ABC transporter
    SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_04225 conjugal transfer protein TraR -0.18
    2 PS417_04170 stringent starvation protein A -0.17
    3 PS417_02375 hypothetical protein -0.17
    4 PS417_14710 isochorismatase -0.17
    5 PS417_00910 diguanylate cyclase -0.17
    6 PS417_13300 short-chain dehydrogenase -0.16
    7 PS417_12895 pyruvate dehydrogenase -0.16
    8 PS417_08435 pilus assembly protein PilZ -0.16
    9 PS417_19220 hypothetical protein -0.16
    10 PS417_10485 phenazine biosynthesis protein PhzF -0.16
    11 PS417_00340 protoheme IX farnesyltransferase -0.15
    12 PS417_14000 chemotaxis protein -0.15
    13 PS417_03800 pilus assembly protein -0.15
    14 PS417_06835 phospholipase -0.15
    15 PS417_10540 NAD-dependent deacetylase -0.14
    16 PS417_15370 kinase -0.14
    17 PS417_07380 hypothetical protein -0.14
    18 PS417_20195 sodium:solute symporter -0.14
    19 PS417_11365 membrane protein -0.14
    20 PS417_07220 LysR family transcriptional regulator -0.14

    Or look for positive cofitness