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  • Negative cofitness for GFF3395 from Sphingobium sp. HT1-2

    Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8)
    SEED: Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25)
    KEGG: quinate dehydrogenase (quinone)

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3437 Transcriptional regulator, AraC family -0.87
    2 GFF3177 hypothetical protein -0.84
    3 GFF5157 hypothetical protein -0.82
    4 GFF3169 Polymer-forming bactofilin -0.80
    5 GFF2006 putative membrane protein -0.79
    6 GFF2559 FIG00005326: uncharacterized protein -0.79
    7 GFF72 Arginine N-succinyltransferase (EC 2.3.1.109) -0.78
    8 GFF32 hypothetical protein -0.77
    9 GFF965 Permease of the drug/metabolite transporter (DMT) superfamily -0.77
    10 GFF3124 hypothetical protein -0.77
    11 GFF3511 hypothetical protein -0.77
    12 GFF1129 hypothetical protein -0.76
    13 GFF5082 Short-chain dehydrodenase (gene dltE) -0.75
    14 GFF3468 hypothetical protein -0.75
    15 GFF5040 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) -0.75
    16 GFF4670 hypothetical protein -0.75
    17 GFF2229 Mannonate dehydratase (EC 4.2.1.8) -0.75
    18 GFF4828 IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog) -0.74
    19 GFF1170 hypothetical protein -0.74
    20 GFF3446 hypothetical protein -0.73

    Or look for positive cofitness