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  • Negative cofitness for GFF3394 from Sphingobium sp. HT1-2

    Transcriptional regulator CidR, LysR family
    SEED: LysR family regulatory protein CidR

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1393 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) -0.79
    2 GFF3011 Di-tripeptide/cation symporter -0.75
    3 GFF471 Uncharacterized amino acid permease, GabP family -0.69
    4 GFF1590 Carboxyl-terminal protease -0.67
    5 GFF3014 hypothetical protein -0.65
    6 GFF4902 hypothetical protein -0.65
    7 GFF4347 hypothetical protein -0.64
    8 GFF4413 hypothetical protein -0.64
    9 GFF2815 L-fuco-beta-pyranose dehydrogenase (EC 1.1.1.122) -0.63
    10 GFF4612 Oxidoreductase, short-chain dehydrogenase/reductase family -0.63
    11 GFF4141 hypothetical protein -0.63
    12 GFF577 TonB-dependent receptor -0.62
    13 GFF867 TonB-dependent receptor -0.62
    14 GFF3772 D-lactate dehydrogenase (EC 1.1.1.28) -0.61
    15 GFF4290 Error-prone repair protein UmuD -0.60
    16 GFF1818 Dna binding response regulator PrrA (RegA) -0.60
    17 GFF2995 Aldose 1-epimerase (EC 5.1.3.3) -0.60
    18 GFF3532 hypothetical protein -0.59
    19 GFF131 Methylmalonyl-CoA epimerase (EC 5.1.99.1) @ Ethylmalonyl-CoA epimerase -0.59
    20 GFF5201 sigma-24 (FecI-like) protein -0.59

    Or look for positive cofitness