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  • Negative cofitness for GFF3390 from Variovorax sp. SCN45

    Transcriptional activator of acetoin dehydrogenase operon AcoR
    SEED: Transcriptional activator of acetoin dehydrogenase operon AcoR

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.54
    2 GFF1372 Uncharacterized MFS-type transporter -0.53
    3 GFF1644 hypothetical protein -0.50
    4 GFF740 Uncharacterized protein YdcJ -0.50
    5 GFF911 KEGG: transcriptional regulator -0.50
    6 GFF3986 Oxidoreductase, short-chain dehydrogenase/reductase family -0.49
    7 GFF12 Two-component system sensor histidine kinase -0.49
    8 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO -0.49
    9 GFF3226 no description -0.49
    10 GFF5792 Mg2+ and Co2+ transporters -0.49
    11 GFF7028 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC -0.48
    12 GFF7326 Integrase -0.48
    13 GFF101 Phosphate-binding DING protein (related to PstS) -0.48
    14 GFF1366 Uncharacterized MFS-type transporter -0.48
    15 GFF3402 no description -0.48
    16 GFF2479 hypothetical protein -0.48
    17 GFF6134 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.48
    18 GFF2107 no description -0.47
    19 GFF2097 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) -0.47
    20 GFF2332 Transcriptional regulator, LysR family -0.47

    Or look for positive cofitness