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  • Negative cofitness for GFF3380 from Variovorax sp. SCN45

    3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
    SEED: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF670 putative amidase Psyr_2260 -0.56
    2 GFF3905 Aconitate hydratase 2 (EC 4.2.1.3) -0.54
    3 GFF5673 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) -0.52
    4 GFF6030 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.52
    5 GFF2357 DNA repair protein RecN -0.52
    6 GFF2 Transcription accessory protein (S1 RNA-binding domain) -0.51
    7 GFF735 no description -0.51
    8 GFF2100 no description -0.51
    9 GFF491 no description -0.50
    10 GFF5318 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) -0.49
    11 GFF6032 Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1) -0.49
    12 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) -0.49
    13 GFF6192 Amidase family protein Atu4441 -0.48
    14 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) -0.48
    15 GFF5805 Putative transmembrane protein -0.48
    16 GFF2927 Peptidylprolyl isomerase, FKBP-type (EC 5.2.1.8) -0.48
    17 GFF962 FIG00932012: hypothetical protein -0.47
    18 GFF2838 hypothetical protein -0.47
    19 GFF7156 hypothetical protein -0.47
    20 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) -0.47

    Or look for positive cofitness