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  • Negative cofitness for GFF3375 from Variovorax sp. SCN45

    DNA-binding transcriptional regulator, MocR family / aminotransferase domain
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2675 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) -0.57
    2 GFF5615 Citrate synthase (si) (EC 2.3.3.1) -0.56
    3 GFF1028 FIG027190: Putative transmembrane protein -0.52
    4 GFF4121 no description -0.52
    5 GFF7132 Xylose isomerase-like TIM-barrel protein KPN_00539 -0.52
    6 GFF2920 TRAP-type C4-dicarboxylate transport system, large permease component -0.51
    7 GFF4863 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.51
    8 GFF7045 hypothetical protein -0.50
    9 GFF7270 Altronate dehydratase (EC 4.2.1.7) -0.50
    10 GFF4027 hypothetical protein -0.50
    11 GFF6734 Transcriptional regulator, AraC family -0.49
    12 GFF4151 RidA/YER057c/UK114 superfamily, group 1 -0.49
    13 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) -0.49
    14 GFF3771 no description -0.49
    15 GFF6545 Uncharacterized MFS-type transporter -0.48
    16 GFF6627 Mobile element protein -0.48
    17 GFF5980 Cyanate hydratase (EC 4.2.1.104) -0.48
    18 GFF5085 hypothetical protein -0.48
    19 GFF2593 Integral membrane protein -0.47
    20 GFF5550 DNA protection during starvation protein -0.47

    Or look for positive cofitness