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  • Negative cofitness for PS417_01710 from Pseudomonas simiae WCS417

    histidine utilization repressor
    SEED: Histidine utilization repressor
    KEGG: GntR family transcriptional regulator, histidine utilization repressor

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06365 RNA polymerase sigma factor -0.48
    2 PS417_20955 secretion protein -0.46
    3 PS417_26320 ABC transporter permease -0.46
    4 PS417_21375 ADP-ribosylglycohydrolase -0.42
    5 PS417_21050 serine acetyltransferase -0.39
    6 PS417_21045 cysteine synthase -0.39
    7 PS417_21040 sulfurylase -0.38
    8 PS417_28265 pyridoxamine kinase -0.38
    9 PS417_16160 ABC transporter substrate-binding protein -0.36
    10 PS417_24595 histidine kinase -0.35
    11 PS417_12610 RNA polymerase sigma factor -0.35
    12 PS417_13425 cupin -0.35
    13 PS417_05070 serine/threonine protein kinase -0.34
    14 PS417_16070 TonB-dependent receptor -0.34
    15 PS417_09620 lipopolysaccharide biosynthesis protein -0.33
    16 PS417_09690 sugar dehydrogenase -0.33
    17 PS417_04735 LysR family transcriptional regulator -0.33
    18 PS417_21130 nitrate reductase -0.33
    19 PS417_27505 transcriptional regulator -0.33
    20 PS417_24605 thiamine-phosphate pyrophosphorylase -0.33

    Or look for positive cofitness