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  • Negative cofitness for GFF3359 from Variovorax sp. SCN45

    Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
    SEED: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain -0.68
    2 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein -0.64
    3 GFF7162 DNA helicase II related protein -0.62
    4 GFF636 Urea ABC transporter, substrate-binding protein UrtA -0.61
    5 GFF4656 TonB-dependent siderophore receptor -0.61
    6 GFF7085 BUG/TctC family periplasmic protein -0.60
    7 GFF2738 hypothetical protein -0.59
    8 GFF2201 hypothetical protein -0.58
    9 GFF6139 Serine/threonine kinase -0.58
    10 GFF5402 Transcriptional regulator, IclR family -0.58
    11 GFF1055 Fumarylacetoacetate hydrolase family protein -0.57
    12 GFF36 Similar to Agmatine deiminase -0.57
    13 GFF3850 Periplasmic serine proteases (ClpP class) -0.57
    14 GFF3906 Acyl-CoA dehydrogenase -0.57
    15 GFF4012 hypothetical protein -0.57
    16 GFF5838 Probable signal peptide protein precursor -0.56
    17 GFF2752 FIG00974677: hypothetical protein -0.56
    18 GFF994 Cytoskeleton protein RodZ -0.56
    19 GFF3130 hypothetical protein -0.56
    20 GFF7373 CaiB/BaiF family protein -0.56

    Or look for positive cofitness