Negative cofitness for GFF3349 from Variovorax sp. SCN45

Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1)
SEED: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system substrate-binding protein

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF326 Polysaccharide deacetylase, caspase activity -0.60
2 GFF2078 hypothetical protein -0.57
3 GFF6079 hypothetical protein -0.55
4 GFF4385 ParA-like protein -0.54
5 GFF7346 Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS -0.54
6 GFF3475 Gate supefamily SpmA/SpmB domains protein -0.52
7 GFF510 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.52
8 GFF4921 hypothetical protein -0.51
9 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily -0.50
10 GFF6533 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) / DNA-3-methyladenine glycosylase II (EC 3.2.2.21) -0.50
11 GFF5684 3-ketoacyl-CoA thiolase (EC 2.3.1.16) -0.49
12 GFF4502 Putative transmembrane protein -0.49
13 GFF6334 no description -0.48
14 GFF361 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17) -0.48
15 GFF4218 no description -0.47
16 GFF4422 Conjugative transfer protein TrbG -0.47
17 GFF4125 DNA-binding transcriptional regulator, MocR family / aminotransferase domain -0.47
18 GFF6157 Carbon monoxide oxidation accessory protein CoxD -0.47
19 GFF5785 FIG00931285: hypothetical protein -0.47
20 GFF5074 Two-component transcriptional response regulator Dtpsy_0213, OmpR family -0.47

Or look for positive cofitness