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  • Negative cofitness for GFF334 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.59
    2 GFF6117 Glycine/D-amino acid oxidases (deaminating) -0.54
    3 GFF3050 Lactam utilization protein LamB -0.54
    4 GFF4576 BUG/TctC family periplasmic protein -0.54
    5 GFF3405 Benzoyl-CoA oxygenase component B -0.53
    6 GFF4203 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative -0.53
    7 GFF5831 Ketosteroid isomerase-related protein -0.52
    8 GFF4818 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.51
    9 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) -0.51
    10 GFF6089 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) -0.51
    11 GFF4588 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) -0.50
    12 GFF3017 T6SS AAA+ chaperone ClpV (TssH) -0.49
    13 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) -0.49
    14 GFF2822 Periplasmic hemin-binding protein -0.49
    15 GFF3782 hypothetical protein -0.49
    16 GFF412 Transcription-repair coupling factor -0.48
    17 GFF2284 FIG00538168: hypothetical protein -0.48
    18 GFF4694 no description -0.48
    19 GFF2137 Ribose operon repressor -0.48
    20 GFF1239 Two-component system sensor histidine kinase -0.48

    Or look for positive cofitness