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  • Negative cofitness for PS417_17070 from Pseudomonas simiae WCS417

    RNA polymerase subunit sigma-24
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_22670 AraC family transcriptional regulator -0.21
    2 PS417_16655 N-hydroxyarylamine O-acetyltransferase -0.19
    3 PS417_18280 transporter -0.19
    4 PS417_00145 LysR family transcriptional regulator -0.18
    5 PS417_04995 glutathione S-transferase -0.18
    6 PS417_03900 type II secretion system protein F -0.18
    7 PS417_23500 D-erythro-7,8-dihydroneopterin triphosphate epimerase -0.18
    8 PS417_15565 transketolase -0.17
    9 PS417_14900 C4-dicarboxylate ABC transporter permease -0.17
    10 PS417_26305 AraC family transcriptional regulator -0.17
    11 PS417_22325 amino acid APC transporter -0.16
    12 PS417_11775 acetoin dehydrogenase -0.16
    13 PS417_15975 glutamate carboxypeptidase -0.16
    14 PS417_06990 hypothetical protein -0.16
    15 PS417_24680 murein transglycosylase -0.16
    16 PS417_19180 sugar-binding protein -0.16
    17 PS417_14325 AraC family transcriptional regulator -0.16
    18 PS417_11935 ABC transporter substrate-binding protein -0.16
    19 PS417_02405 hypothetical protein -0.16
    20 PS417_09585 acetyltransferase -0.16

    Or look for positive cofitness