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  • Negative cofitness for GFF3329 from Variovorax sp. SCN45

    Terpene utilization protein AtuA
    SEED: 3-hydroxy-3isohexenylglutaryl-CoA:acetate lyase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1702 hypothetical protein -0.57
    2 GFF1377 Phosphohydrolase (MutT/nudix family protein) -0.55
    3 GFF4506 hypothetical protein -0.54
    4 GFF7382 hypothetical protein AF1210 -0.53
    5 GFF6446 Xaa-Pro aminopeptidase (EC 3.4.11.9) -0.53
    6 GFF6084 Aerotolerance protein BatA -0.51
    7 GFF2250 Putative stomatin/prohibitin-family membrane protease subunit aq_911 -0.50
    8 GFF1603 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) -0.50
    9 GFF6479 hypothetical protein -0.49
    10 GFF543 Uncharacterized deacetylase PA5390 -0.49
    11 GFF4188 Signal peptidase I (EC 3.4.21.89) -0.49
    12 GFF4092 Copper tolerance protein -0.49
    13 GFF6502 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) -0.48
    14 GFF4614 Transcriptional regulator, AraC family -0.47
    15 GFF6344 HipA-like -0.47
    16 GFF5600 no description -0.47
    17 GFF3112 Methionine ABC transporter substrate-binding protein -0.46
    18 GFF6717 hypothetical protein -0.46
    19 GFF2430 Protein secretion chaperonin CsaA -0.46
    20 GFF4579 putative oxidoreductase, nitronate monooxygenase family -0.46

    Or look for positive cofitness