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  • Negative cofitness for PS417_17015 from Pseudomonas simiae WCS417

    Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data)
    Original annotation: isovaleryl-CoA dehydrogenase
    SEED: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
    KEGG: isovaleryl-CoA dehydrogenase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_22965 DNA mismatch repair protein MutT -0.28
    2 PS417_26130 membrane protein -0.19
    3 PS417_21275 GntR family transcriptional regulator -0.19
    4 PS417_09595 membrane protein -0.17
    5 PS417_17000 MerR family transcriptional regulator -0.17
    6 PS417_20880 GntR family transcriptional regulator -0.17
    7 PS417_07205 LysR family transcriptional regulator -0.17
    8 PS417_09620 lipopolysaccharide biosynthesis protein -0.16
    9 PS417_03135 acyl dehydratase -0.16
    10 PS417_06390 DEAD/DEAH box helicase -0.16
    11 PS417_12245 GNAT family acetyltransferase -0.16
    12 PS417_28250 cell wall assembly protein -0.15
    13 PS417_09625 sugar ABC transporter substrate-binding protein -0.15
    14 PS417_24905 DNA-binding protein -0.15
    15 PS417_26625 hypothetical protein -0.15
    16 PS417_04890 ATP-dependent RNA helicase RhlB -0.15
    17 PS417_17085 fimbrial assembly protein -0.15
    18 PS417_26275 glycine/betaine ABC transporter substrate-binding protein -0.15
    19 PS417_03555 ATPase AAA -0.14
    20 PS417_21700 arginine N-succinyltransferase -0.14

    Or look for positive cofitness