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  • Negative cofitness for GFF3309 from Variovorax sp. SCN45

    Beta-hexosaminidase (EC 3.2.1.52)
    SEED: Beta-hexosaminidase (EC 3.2.1.52)
    KEGG: beta-N-acetylhexosaminidase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5238 General secretion pathway protein L -0.58
    2 GFF3807 FIG00538552: hypothetical protein -0.56
    3 GFF5848 Flagellar motor protein -0.55
    4 GFF4983 fumarate reductase/succinate dehydrogenase flavoprotein-like -0.54
    5 GFF250 Homoserine/homoserine lactone efflux protein -0.53
    6 GFF541 Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase -0.53
    7 GFF4385 ParA-like protein -0.52
    8 GFF6313 Enoyl-CoA hydratase (EC 4.2.1.17) -0.52
    9 GFF3576 no description -0.51
    10 GFF6319 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.51
    11 GFF5215 Efflux ABC transporter, permease/ATP-binding protein -0.51
    12 GFF1234 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) -0.51
    13 GFF2535 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) -0.51
    14 GFF4684 Na+/H+ antiporter -0.50
    15 GFF5684 3-ketoacyl-CoA thiolase (EC 2.3.1.16) -0.49
    16 GFF1307 Homoserine dehydrogenase (EC 1.1.1.3) -0.49
    17 GFF890 Two-component system sensor histidine kinase -0.49
    18 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) -0.49
    19 GFF2649 putative autotransporter protein -0.48
    20 GFF2593 Integral membrane protein -0.48

    Or look for positive cofitness