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  • Negative cofitness for GFF3301 from Variovorax sp. SCN45

    Lignostilbene-alpha,beta-dioxygenase and related enzymes
    SEED: Lignostilbene-alpha,beta-dioxygenase and related enzymes
    KEGG: carotenoid cleavage dioxygenase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) -0.57
    2 GFF7272 D-glucarate permease -0.56
    3 GFF7097 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) -0.51
    4 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) -0.51
    5 GFF5238 General secretion pathway protein L -0.51
    6 GFF7269 Altronate dehydratase (EC 4.2.1.7) -0.50
    7 GFF1848 Proteins incorrectly called adenylate cyclase -0.50
    8 GFF5997 hypothetical protein -0.49
    9 GFF3760 putative lipoprotein -0.49
    10 GFF6472 membrane efflux protein -0.49
    11 GFF2207 Flp pilus assembly protein TadB -0.48
    12 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) -0.48
    13 GFF5160 Outer membrane protein W precursor -0.47
    14 GFF2918 TRAP-type C4-dicarboxylate transport system, periplasmic component -0.47
    15 GFF3407 MaoC domain protein -0.47
    16 GFF5004 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) -0.46
    17 GFF6169 Na(+) H(+) antiporter subunit F -0.46
    18 GFF4871 FIG00457034: hypothetical protein -0.46
    19 GFF2106 hypothetical protein -0.45
    20 GFF5519 Transcriptional regulator -0.45

    Or look for positive cofitness